CDS

Accession Number TCMCG066C36478
gbkey CDS
Protein Id XP_034572840.1
Location join(39976098..39976133,39976241..39976388,39978484..39979025,39979357..39979452,39979669..39980493,39981664..39981779,39981863..39981950,39982058..39982193,39982275..39982330,39982401..39982457,39982546..39982692,39983400..39983480,39983551..39983809,39984898..39985049)
Gene LOC117837343
GeneID 117837343
Organism Setaria viridis

Protein

Length 912aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034716949.1
Definition transcription initiation factor TFIID subunit 4b-like isoform X4 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category K
Description RCD1-SRO-TAF4 (RST) plant domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03129        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001650        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005669        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051059        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901796        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCCCATCATGAAGCTCCTCGAGGACGACGAGGACGAGAGCCTGCACTCGGGCGCCGACGTCGAGGCCTTCACGGCGGCGCTCAACCGCGAGGTGGAGGCCAGTGCCAGCACCAGCAGCACCATCAGTGCCCCGCCCGCCGCCTCCTCCTCCTCGTCCCAGCCTACGGATCACGGCGCCGCACTTCTACCTCAGGAAAACAAGTCATTGTTAAACCATGGTCATGGACAGTGGCAAGATCGAGTAAAGAATGAAACTGCAAACCAGGAGAGTCAACAACAGGAACAGACACATCTACTTAGAAATGATCAGCCATCAAGACCTGAAATTGTTTCTCAAGGTTCTGATAACAAAGACCTTACTTCTAATACACCAAAAGAGTGCGAGTTACTGAAAGTAAAGCAAGAGCTTGGAAACACGTCTCAACAAGGTATTGTTGCTCAGCAGCAGCCTATGCAGCAAATGAAGAGTGAACAAACACCAATTGTTGCTCAGCAGCAGCCTATGCCACAAATGAAGAGTGAACAAGCACCAATTGTCGCTCTGCAGCAGCCTTTGCAGCAAATGAAGAGTCAACAAACACCTCACACAAATCAAACGAATGGTGCAACTACAGCAGCAAAAGCCCCAGTTGTTACATTTCACATGTTACTTCCGATTTTGAGACGCTACATTGACAAAGACAAGGATATGCAAGTTCAGTCCATTTTTGCCAAGTTGCGGAAAAATGAAGTCAGCAAGGAACACTTTTTAAAAGTTGTAAGGAATATTGTTGGCGATAAGGTGCTTAAGCTAGCTCTTTCGGAATATCAAATGCAGGCACAGCGAAATACTCAGACAAATCCAGGCAACTATTCTTTATTAAGTCAAGTTTCTGGTCAGCAGACTGTTCCTAGTGGTTCTATGACAGATGAGCAGGAGGCATATCCAGGGGCTCACACCATCCCTATGAAACAAGCTATTGACAACCTAAGACCACCTCAATTCCGGCCTTCCTTGTCTAGCCAAGTGCAGAGTATTAGGGGTTATTCACCTTCACAAAGCAATGCACATAAGGCTAATGAAACAGGAAACATGTCAGATGGGAAAGGAGCTCATATGCTACAAGCCCGTCCACCCAATACCTTAACTCCGGCGCAAACAATGCAGCATCATGTTCAGCGTCCACAAACACCCTCGCCAATGTTTGGGACAAATAGTATTCATGCACGTCCATTTCCAAGACCAGTTGGAAGTCCAGCTGCATCATTTAGACCACAAATGACAGATCCGAATCAAAGAGCACAATTGGTCCAGGGAGCTGTGACCACAGTAGCTGGGAGTGTGCCAACACAATCTATAGTGTCTGGAAATGCACCAACTAATCAATCTACATGGCAAAAATCAGCAAACAAGGAGCAGAAAACTAATTCTTTCACTCCAACAGCACATATGAATAAGGAAACTATTAGCCAAAACTCGGAATCTTCGCAGAATTCTTTTGTTGCAATGCATGCAAAACAAGTCAATCAAGCCCCAGGATCTTCAAAAGGTGGTGGTGGCATGGAAAACCAGTCACCAAAATTGAGTGCTTCTAAGTCTTCGACCACAACAAACTCAAGTCAGACTCAATCTCATGTCACTCAAGCAGAGCCTAAATTGCAGGTCCAATCTTCTGTGCAAGCACCTCCTGCGGCAGCTTCTAAAACACCTCAGAGGAAGGCATCTTCTGGACAGAAGAAGCCTCTGGAAGCATTAGGCTCATCCCCTCCACCATCTAGCAAAAAGCAGAAGACATCTGGAGGTTTCCATGAACAAAGCATTGACCAGCTTAATGATGTCACAGCAGTTAGTGGTGTTAATCTGAGGGAAGAAGAGGAACAACTTTTCTCTGCTCCAAAGGAAGAGAGTCGAGTTTCAGAAGCTGCTCGGAGAGTTGTTCAACTAGAAGAAGAAAAGCTCATTCTACAGAAGGGACCACTGGCAAGGAAATTAGCAGAAATCATGAGGAAATGTAATTTGAAGGTCATTGGCACTGATGTGGAACGTTGTCTATCGATGTGCGTTGAGGAGAGGTTACGAGGATTTATAAGCGATATAATAAGGTTCTCTAAACAGAGGGTTGATGTTGAAAAGTCAAGGCATCGTTTTTATCCGTTATCCTCAGATGTTCGCAGTCATATTATGAGGGTGAACCGAGAAGCTAAAGAACAATGGGAGAAAAAGCAAGCTGAAGATGCTGAGAGAATAAGGAAACAAAATGATTACATGCAGGGAGATGGCAATGCAAATATTGATCTAGAAAAAGACAAGAACGAGACCCGTGCCTCGTCAAAGCATGCAAAGACTTACAAGGAGGACGATGATAAGATGAGAACTACAGCTGCAAATGTTGCTGCGCGAGTTGCAGCTGGTGGAGATGACATGCTGTCAAAGTGGCAATTGCTAGCTGAACGAAATAAACAGAGAAGTGAGGGAGGTGACGGTTCTTCTGGCTCTGTACCAGGTAACATGTTGCAACACAAGCCATCACTAAAATCTGGGAAAGACTCGATGGAAGATCAGGGAATTGAAAAGAGAGGCTACTCCACAATGCTTGGATCTGGTGGTATTAGAAGGTCACCACTAACAAAAGTGGCACGGAGTGTTTCAGTAAAAGATGTGATAGCAGCACTGGAGCGAGAGCCTCAGATGTCAAAATCCTCTTTACTTTTCCAGCTATACGGGAGGCCATTGACAGAACCTGCTGCAAAGTAA
Protein:  
MDPIMKLLEDDEDESLHSGADVEAFTAALNREVEASASTSSTISAPPAASSSSSQPTDHGAALLPQENKSLLNHGHGQWQDRVKNETANQESQQQEQTHLLRNDQPSRPEIVSQGSDNKDLTSNTPKECELLKVKQELGNTSQQGIVAQQQPMQQMKSEQTPIVAQQQPMPQMKSEQAPIVALQQPLQQMKSQQTPHTNQTNGATTAAKAPVVTFHMLLPILRRYIDKDKDMQVQSIFAKLRKNEVSKEHFLKVVRNIVGDKVLKLALSEYQMQAQRNTQTNPGNYSLLSQVSGQQTVPSGSMTDEQEAYPGAHTIPMKQAIDNLRPPQFRPSLSSQVQSIRGYSPSQSNAHKANETGNMSDGKGAHMLQARPPNTLTPAQTMQHHVQRPQTPSPMFGTNSIHARPFPRPVGSPAASFRPQMTDPNQRAQLVQGAVTTVAGSVPTQSIVSGNAPTNQSTWQKSANKEQKTNSFTPTAHMNKETISQNSESSQNSFVAMHAKQVNQAPGSSKGGGGMENQSPKLSASKSSTTTNSSQTQSHVTQAEPKLQVQSSVQAPPAAASKTPQRKASSGQKKPLEALGSSPPPSSKKQKTSGGFHEQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARRVVQLEEEKLILQKGPLARKLAEIMRKCNLKVIGTDVERCLSMCVEERLRGFISDIIRFSKQRVDVEKSRHRFYPLSSDVRSHIMRVNREAKEQWEKKQAEDAERIRKQNDYMQGDGNANIDLEKDKNETRASSKHAKTYKEDDDKMRTTAANVAARVAAGGDDMLSKWQLLAERNKQRSEGGDGSSGSVPGNMLQHKPSLKSGKDSMEDQGIEKRGYSTMLGSGGIRRSPLTKVARSVSVKDVIAALEREPQMSKSSLLFQLYGRPLTEPAAK